Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf4Q8K4J2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Ebf4Q8K4J2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.52■□□□□ 0.07
Ebf4Q8K4J2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ebf4Q8K4J2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Gm13401-201ENSMUST00000117074 291 ntBASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Gm6139-201ENSMUST00000079261 882 ntBASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ebf4Q8K4J2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Gm12821-201ENSMUST00000120022 600 ntBASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Gm27454-201ENSMUST00000185090 204 ntBASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ebf4Q8K4J2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Gm10418-201ENSMUST00000100943 576 ntBASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Ebf4Q8K4J2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Gm38285-201ENSMUST00000192928 922 ntBASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ebf4Q8K4J2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf4Q8K4J2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf4Q8K4J2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ebf4Q8K4J2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms