Protein–RNA interactions for Protein: Q8K268

Abcf3, ATP-binding cassette sub-family F member 3, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf3Q8K268 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Nespas-201ENSMUST00000143738 1083 ntBASIC17.05■□□□□ 0.32
Abcf3Q8K268 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.05■□□□□ 0.32
Abcf3Q8K268 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Abcf3Q8K268 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.04■□□□□ 0.32
Abcf3Q8K268 Gm7290-201ENSMUST00000104990 617 ntBASIC17.04■□□□□ 0.32
Abcf3Q8K268 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Gm12918-201ENSMUST00000120234 636 ntBASIC17.04■□□□□ 0.32
Abcf3Q8K268 Gm15710-201ENSMUST00000121821 636 ntBASIC17.04■□□□□ 0.32
Abcf3Q8K268 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Gm5075-201ENSMUST00000196916 622 ntBASIC17.04■□□□□ 0.32
Abcf3Q8K268 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.04■□□□□ 0.32
Abcf3Q8K268 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.04■□□□□ 0.32
Abcf3Q8K268 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abcf3Q8K268 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.03■□□□□ 0.32
Abcf3Q8K268 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Gm29791-202ENSMUST00000207888 369 ntBASIC17.03■□□□□ 0.32
Abcf3Q8K268 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.03■□□□□ 0.32
Abcf3Q8K268 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf3Q8K268 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf3Q8K268 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf3Q8K268 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf3Q8K268 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.02■□□□□ 0.32
Abcf3Q8K268 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf3Q8K268 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Abcf3Q8K268 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.02■□□□□ 0.32
Abcf3Q8K268 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abcf3Q8K268 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.02■□□□□ 0.31
Abcf3Q8K268 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf3Q8K268 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abcf3Q8K268 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.02■□□□□ 0.31
Abcf3Q8K268 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.01■□□□□ 0.31
Abcf3Q8K268 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abcf3Q8K268 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf3Q8K268 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf3Q8K268 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf3Q8K268 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Abcf3Q8K268 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms