Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc47a1Q8K0H1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Slc47a1Q8K0H1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Gm11643-201ENSMUST00000119578 864 ntBASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc47a1Q8K0H1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Gm15378-201ENSMUST00000121894 207 ntBASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc47a1Q8K0H1 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc47a1Q8K0H1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Gm13401-201ENSMUST00000117074 291 ntBASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Gm6576-201ENSMUST00000169678 883 ntBASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc47a1Q8K0H1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms