Protein–RNA interactions for Protein: Q8K099

Lrit1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrit1Q8K099 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Lrit1Q8K099 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrit1Q8K099 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrit1Q8K099 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrit1Q8K099 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Lrit1Q8K099 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lrit1Q8K099 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Lrit1Q8K099 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrit1Q8K099 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.25■□□□□ 0.99
Lrit1Q8K099 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.25■□□□□ 0.99
Lrit1Q8K099 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.25■□□□□ 0.99
Lrit1Q8K099 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Gm14057-201ENSMUST00000120631 482 ntBASIC21.25■□□□□ 0.99
Lrit1Q8K099 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Gm37584-201ENSMUST00000193595 1290 ntBASIC21.25■□□□□ 0.99
Lrit1Q8K099 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrit1Q8K099 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Gm5648-201ENSMUST00000122244 1587 ntBASIC21.24■□□□□ 0.99
Lrit1Q8K099 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Gm15920-201ENSMUST00000118998 402 ntBASIC21.24■□□□□ 0.99
Lrit1Q8K099 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Gm5186-201ENSMUST00000218781 920 ntBASIC21.24■□□□□ 0.99
Lrit1Q8K099 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrit1Q8K099 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit1Q8K099 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit1Q8K099 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit1Q8K099 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit1Q8K099 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit1Q8K099 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit1Q8K099 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.23■□□□□ 0.99
Lrit1Q8K099 Ndufaf2-202ENSMUST00000223734 556 ntBASIC21.23■□□□□ 0.99
Lrit1Q8K099 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.23■□□□□ 0.99
Lrit1Q8K099 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit1Q8K099 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrit1Q8K099 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC21.22■□□□□ 0.99
Lrit1Q8K099 AC158982.1-201ENSMUST00000228377 901 ntBASIC21.22■□□□□ 0.99
Lrit1Q8K099 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrit1Q8K099 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrit1Q8K099 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Lrit1Q8K099 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrit1Q8K099 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrit1Q8K099 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrit1Q8K099 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC21.21■□□□□ 0.99
Lrit1Q8K099 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrit1Q8K099 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrit1Q8K099 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Lrit1Q8K099 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit1Q8K099 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit1Q8K099 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit1Q8K099 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit1Q8K099 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC21.2■□□□□ 0.98
Lrit1Q8K099 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit1Q8K099 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit1Q8K099 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Lrit1Q8K099 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrit1Q8K099 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.19■□□□□ 0.98
Lrit1Q8K099 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Lrit1Q8K099 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Lrit1Q8K099 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrit1Q8K099 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms