Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rftn2Q8CHX7 Phf7-203ENSMUST00000226565 1971 ntBASIC18.04■□□□□ 0.48
Rftn2Q8CHX7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rftn2Q8CHX7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rftn2Q8CHX7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Gm45328-201ENSMUST00000210942 917 ntBASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Rftn2Q8CHX7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rftn2Q8CHX7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rftn2Q8CHX7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rftn2Q8CHX7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rftn2Q8CHX7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rftn2Q8CHX7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rftn2Q8CHX7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Rftn2Q8CHX7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rftn2Q8CHX7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rftn2Q8CHX7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Gm10819-201ENSMUST00000099988 561 ntBASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rftn2Q8CHX7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rftn2Q8CHX7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rftn2Q8CHX7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.99■□□□□ 0.47
Rftn2Q8CHX7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rftn2Q8CHX7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rftn2Q8CHX7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rftn2Q8CHX7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rftn2Q8CHX7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rftn2Q8CHX7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rftn2Q8CHX7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rftn2Q8CHX7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Gm44450-201ENSMUST00000199528 114 ntBASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rftn2Q8CHX7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms