Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbm28Q8CGC6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rbm28Q8CGC6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rbm28Q8CGC6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Gm14859-201ENSMUST00000117752 357 ntBASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Gm5587-201ENSMUST00000206270 674 ntBASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rbm28Q8CGC6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rbm28Q8CGC6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Rbm28Q8CGC6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rbm28Q8CGC6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.02■□□□□ 0.79
Rbm28Q8CGC6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rbm28Q8CGC6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rbm28Q8CGC6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Gm9013-201ENSMUST00000132939 882 ntBASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rbm28Q8CGC6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Gm43702-201ENSMUST00000198772 2546 ntBASIC20■□□□□ 0.79
Rbm28Q8CGC6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rbm28Q8CGC6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rbm28Q8CGC6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbm28Q8CGC6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbm28Q8CGC6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rbm28Q8CGC6 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.99■□□□□ 0.79
Rbm28Q8CGC6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbm28Q8CGC6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rbm28Q8CGC6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms