Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab43Q8CG50 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rab43Q8CG50 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab43Q8CG50 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab43Q8CG50 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Rab43Q8CG50 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab43Q8CG50 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab43Q8CG50 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab43Q8CG50 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab43Q8CG50 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab43Q8CG50 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rab43Q8CG50 Gm11336-201ENSMUST00000118168 334 ntBASIC16.52■□□□□ 0.24
Rab43Q8CG50 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab43Q8CG50 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab43Q8CG50 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab43Q8CG50 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab43Q8CG50 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab43Q8CG50 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab43Q8CG50 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rab43Q8CG50 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab43Q8CG50 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.52■□□□□ 0.23
Rab43Q8CG50 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.51■□□□□ 0.23
Rab43Q8CG50 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rab43Q8CG50 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rab43Q8CG50 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Gm24589-201ENSMUST00000116692 94 ntBASIC16.5■□□□□ 0.23
Rab43Q8CG50 Olfr129-201ENSMUST00000122318 993 ntBASIC16.5■□□□□ 0.23
Rab43Q8CG50 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab43Q8CG50 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Gm18115-201ENSMUST00000221209 621 ntBASIC16.49■□□□□ 0.23
Rab43Q8CG50 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab43Q8CG50 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab43Q8CG50 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.48■□□□□ 0.23
Rab43Q8CG50 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab43Q8CG50 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab43Q8CG50 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rab43Q8CG50 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rab43Q8CG50 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab43Q8CG50 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.47■□□□□ 0.23
Rab43Q8CG50 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab43Q8CG50 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rab43Q8CG50 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms