Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc28aQ8CEI3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc28aQ8CEI3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc28aQ8CEI3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc28aQ8CEI3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc28aQ8CEI3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc28aQ8CEI3 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.92■□□□□ 0.46
Ccdc28aQ8CEI3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc28aQ8CEI3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc28aQ8CEI3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc28aQ8CEI3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc28aQ8CEI3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Gm27405-201ENSMUST00000184201 112 ntBASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc28aQ8CEI3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Gm12933-201ENSMUST00000120203 872 ntBASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Ccdc28aQ8CEI3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.87■□□□□ 0.45
Ccdc28aQ8CEI3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms