Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim52Q8CDV4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Gm15372-201ENSMUST00000120729 834 ntBASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim52Q8CDV4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.93■□□□□ 0.94
Trim52Q8CDV4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Gm27459-201ENSMUST00000184860 107 ntBASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim52Q8CDV4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim52Q8CDV4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Gm13312-201ENSMUST00000119631 718 ntBASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim52Q8CDV4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim52Q8CDV4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Trim52Q8CDV4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim52Q8CDV4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim52Q8CDV4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim52Q8CDV4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim52Q8CDV4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim52Q8CDV4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim52Q8CDV4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms