Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf31Q8CCF0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf31Q8CCF0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Gm11355-201ENSMUST00000121120 306 ntBASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Prpf31Q8CCF0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Gm21362-201ENSMUST00000194272 928 ntBASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Gm5587-201ENSMUST00000206270 674 ntBASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf31Q8CCF0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Prpf31Q8CCF0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf31Q8CCF0 Gm9013-201ENSMUST00000132939 882 ntBASIC18.52■□□□□ 0.56
Prpf31Q8CCF0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Prpf31Q8CCF0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.52■□□□□ 0.56
Prpf31Q8CCF0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf31Q8CCF0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf31Q8CCF0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf31Q8CCF0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf31Q8CCF0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf31Q8CCF0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf31Q8CCF0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf31Q8CCF0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Gm33142-201ENSMUST00000193913 867 ntBASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Gm7367-201ENSMUST00000057611 492 ntBASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf31Q8CCF0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms