Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Alx1Q8C8B0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Gm11336-201ENSMUST00000118168 334 ntBASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Gm9013-201ENSMUST00000132939 882 ntBASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Gm37722-201ENSMUST00000193757 208 ntBASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Alx1Q8C8B0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Alx1Q8C8B0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Gm5587-201ENSMUST00000206270 674 ntBASIC19.78■□□□□ 0.76
Alx1Q8C8B0 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.78■□□□□ 0.76
Alx1Q8C8B0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Alx1Q8C8B0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Alx1Q8C8B0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Alx1Q8C8B0 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Alx1Q8C8B0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 AA414768-201ENSMUST00000121924 1257 ntBASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms