Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Uba3Q8C878 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Uba3Q8C878 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Uba3Q8C878 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Uba3Q8C878 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.88■□□□□ 0.45
Uba3Q8C878 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Uba3Q8C878 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Uba3Q8C878 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.88■□□□□ 0.45
Uba3Q8C878 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Uba3Q8C878 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Uba3Q8C878 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.87■□□□□ 0.45
Uba3Q8C878 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.87■□□□□ 0.45
Uba3Q8C878 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.87■□□□□ 0.45
Uba3Q8C878 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.87■□□□□ 0.45
Uba3Q8C878 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.87■□□□□ 0.45
Uba3Q8C878 Gm27000-201ENSMUST00000182943 842 ntBASIC17.87■□□□□ 0.45
Uba3Q8C878 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Uba3Q8C878 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.87■□□□□ 0.45
Uba3Q8C878 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Uba3Q8C878 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Uba3Q8C878 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.86■□□□□ 0.45
Uba3Q8C878 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Uba3Q8C878 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.85■□□□□ 0.45
Uba3Q8C878 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Uba3Q8C878 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.85■□□□□ 0.45
Uba3Q8C878 Gm18959-201ENSMUST00000208954 655 ntBASIC17.85■□□□□ 0.45
Uba3Q8C878 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Uba3Q8C878 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.84■□□□□ 0.45
Uba3Q8C878 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Uba3Q8C878 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.84■□□□□ 0.45
Uba3Q8C878 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.84■□□□□ 0.45
Uba3Q8C878 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Uba3Q8C878 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Uba3Q8C878 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Uba3Q8C878 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.84■□□□□ 0.45
Uba3Q8C878 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Uba3Q8C878 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Uba3Q8C878 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.83■□□□□ 0.45
Uba3Q8C878 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Uba3Q8C878 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Uba3Q8C878 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Uba3Q8C878 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Uba3Q8C878 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Uba3Q8C878 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Uba3Q8C878 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Uba3Q8C878 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Uba3Q8C878 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.83■□□□□ 0.44
Uba3Q8C878 Mir5130-201ENSMUST00000175160 84 ntBASIC17.83■□□□□ 0.44
Uba3Q8C878 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms