Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.71■□□□□ 0.58
Trim9Q8C7M3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim9Q8C7M3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim9Q8C7M3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim9Q8C7M3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Gm30025-201ENSMUST00000218555 728 ntBASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim9Q8C7M3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim9Q8C7M3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms