Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.13■□□□□ 0.17
Eri3Q8C460 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.13■□□□□ 0.17
Eri3Q8C460 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Eri3Q8C460 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.13■□□□□ 0.17
Eri3Q8C460 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Eri3Q8C460 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.13■□□□□ 0.17
Eri3Q8C460 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.13■□□□□ 0.17
Eri3Q8C460 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Eri3Q8C460 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Eri3Q8C460 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Eri3Q8C460 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.12■□□□□ 0.17
Eri3Q8C460 Gm11539-201ENSMUST00000119837 557 ntBASIC16.12■□□□□ 0.17
Eri3Q8C460 Gm13436-201ENSMUST00000120418 567 ntBASIC16.12■□□□□ 0.17
Eri3Q8C460 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Gm18958-201ENSMUST00000174258 762 ntBASIC16.12■□□□□ 0.17
Eri3Q8C460 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.12■□□□□ 0.17
Eri3Q8C460 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Eri3Q8C460 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.11■□□□□ 0.17
Eri3Q8C460 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Eri3Q8C460 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Eri3Q8C460 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Eri3Q8C460 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.11■□□□□ 0.17
Eri3Q8C460 Gm15565-201ENSMUST00000118890 427 ntBASIC16.11■□□□□ 0.17
Eri3Q8C460 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Eri3Q8C460 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.1■□□□□ 0.17
Eri3Q8C460 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.1■□□□□ 0.17
Eri3Q8C460 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Eri3Q8C460 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.1■□□□□ 0.17
Eri3Q8C460 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Eri3Q8C460 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Eri3Q8C460 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Eri3Q8C460 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Eri3Q8C460 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Eri3Q8C460 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Eri3Q8C460 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Eri3Q8C460 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Eri3Q8C460 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms