Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Trmt13-210ENSMUST00000198454 880 ntBASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps9d1Q8C190 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps9d1Q8C190 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps9d1Q8C190 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Gm12896-201ENSMUST00000118430 226 ntBASIC15.87■□□□□ 0.13
Vps9d1Q8C190 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps9d1Q8C190 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps9d1Q8C190 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms