Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Mir7071-201ENSMUST00000184847 69 ntBASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ppp4r4Q8C0Y0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Gm30025-201ENSMUST00000218555 728 ntBASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ppp4r4Q8C0Y0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Gm15565-201ENSMUST00000118890 427 ntBASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Gm24841-201ENSMUST00000158676 357 ntBASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ppp4r4Q8C0Y0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Mir8112-201ENSMUST00000184382 131 ntBASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ppp4r4Q8C0Y0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Gm3375-201ENSMUST00000203929 796 ntBASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ppp4r4Q8C0Y0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms