Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Zkscan4-202ENSMUST00000225845 1506 ntBASIC23.96■■□□□ 1.43
Usp47Q8BY87 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Usp47Q8BY87 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Usp47Q8BY87 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Gm6623-201ENSMUST00000173570 544 ntBASIC23.95■■□□□ 1.42
Usp47Q8BY87 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Gm18421-201ENSMUST00000204122 625 ntBASIC23.95■■□□□ 1.42
Usp47Q8BY87 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp47Q8BY87 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp47Q8BY87 Gm43338-201ENSMUST00000198617 2223 ntBASIC23.94■■□□□ 1.42
Usp47Q8BY87 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp47Q8BY87 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC23.94■■□□□ 1.42
Usp47Q8BY87 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC23.94■■□□□ 1.42
Usp47Q8BY87 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC23.94■■□□□ 1.42
Usp47Q8BY87 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Usp47Q8BY87 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Usp47Q8BY87 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp47Q8BY87 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp47Q8BY87 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC23.93■■□□□ 1.42
Usp47Q8BY87 AC130713.1-201ENSMUST00000228853 1096 ntBASIC23.93■■□□□ 1.42
Usp47Q8BY87 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp47Q8BY87 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Usp47Q8BY87 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Usp47Q8BY87 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp47Q8BY87 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Usp47Q8BY87 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp47Q8BY87 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp47Q8BY87 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Usp47Q8BY87 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp47Q8BY87 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC23.92■■□□□ 1.42
Usp47Q8BY87 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
Usp47Q8BY87 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Zfp264-201ENSMUST00000208656 1563 ntBASIC23.92■■□□□ 1.42
Usp47Q8BY87 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp47Q8BY87 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Gm27704-201ENSMUST00000185094 107 ntBASIC23.91■■□□□ 1.42
Usp47Q8BY87 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Gm43294-201ENSMUST00000202850 2490 ntBASIC23.91■■□□□ 1.42
Usp47Q8BY87 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp47Q8BY87 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Gm14859-201ENSMUST00000117752 357 ntBASIC23.9■■□□□ 1.42
Usp47Q8BY87 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Ank2-226ENSMUST00000189368 339 ntBASIC23.9■■□□□ 1.42
Usp47Q8BY87 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp47Q8BY87 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Usp47Q8BY87 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Usp47Q8BY87 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp47Q8BY87 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp47Q8BY87 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp47Q8BY87 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp47Q8BY87 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp47Q8BY87 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC23.89■■□□□ 1.41
Usp47Q8BY87 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC23.89■■□□□ 1.41
Usp47Q8BY87 AC107711.5-202ENSMUST00000226429 702 ntBASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms