Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cdk5rap1Q8BTW8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdk5rap1Q8BTW8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdk5rap1Q8BTW8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdk5rap1Q8BTW8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Cdk5rap1Q8BTW8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdk5rap1Q8BTW8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cdk5rap1Q8BTW8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdk5rap1Q8BTW8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.08■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cdk5rap1Q8BTW8 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.08■□□□□ 0.16
Cdk5rap1Q8BTW8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.08■□□□□ 0.16
Cdk5rap1Q8BTW8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdk5rap1Q8BTW8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cdk5rap1Q8BTW8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm29518-201ENSMUST00000190858 372 ntBASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm37722-201ENSMUST00000193757 208 ntBASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdk5rap1Q8BTW8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cdk5rap1Q8BTW8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm7284-201ENSMUST00000131667 944 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms