Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pbrm1Q8BSQ9 Gm5837-201ENSMUST00000191844 1369 ntBASIC26.49■■□□□ 1.83
Pbrm1Q8BSQ9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC26.49■■□□□ 1.83
Pbrm1Q8BSQ9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC26.49■■□□□ 1.83
Pbrm1Q8BSQ9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC26.49■■□□□ 1.83
Pbrm1Q8BSQ9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pbrm1Q8BSQ9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pbrm1Q8BSQ9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pbrm1Q8BSQ9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC26.49■■□□□ 1.83
Pbrm1Q8BSQ9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pbrm1Q8BSQ9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pbrm1Q8BSQ9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pbrm1Q8BSQ9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Pbrm1Q8BSQ9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC26.48■■□□□ 1.83
Pbrm1Q8BSQ9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC26.48■■□□□ 1.83
Pbrm1Q8BSQ9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC26.48■■□□□ 1.83
Pbrm1Q8BSQ9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC26.48■■□□□ 1.83
Pbrm1Q8BSQ9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pbrm1Q8BSQ9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Gm37500-201ENSMUST00000192059 1443 ntBASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Gm26308-201ENSMUST00000157768 69 ntBASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pbrm1Q8BSQ9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pbrm1Q8BSQ9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC26.46■■□□□ 1.83
Pbrm1Q8BSQ9 Mir8117-201ENSMUST00000184773 107 ntBASIC26.46■■□□□ 1.83
Pbrm1Q8BSQ9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Pbrm1Q8BSQ9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC26.46■■□□□ 1.83
Pbrm1Q8BSQ9 Gm3928-201ENSMUST00000121141 1307 ntBASIC26.46■■□□□ 1.83
Pbrm1Q8BSQ9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC26.45■■□□□ 1.83
Pbrm1Q8BSQ9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pbrm1Q8BSQ9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Pbrm1Q8BSQ9 Gm25406-201ENSMUST00000157599 105 ntBASIC26.45■■□□□ 1.82
Pbrm1Q8BSQ9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
Pbrm1Q8BSQ9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pbrm1Q8BSQ9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 AC159114.1-201ENSMUST00000220349 266 ntBASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Gm11764-201ENSMUST00000120221 623 ntBASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
Pbrm1Q8BSQ9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pbrm1Q8BSQ9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pbrm1Q8BSQ9 Gm9172-201ENSMUST00000212092 954 ntBASIC26.42■■□□□ 1.82
Pbrm1Q8BSQ9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC26.42■■□□□ 1.82
Pbrm1Q8BSQ9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pbrm1Q8BSQ9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pbrm1Q8BSQ9 Gm15920-201ENSMUST00000118998 402 ntBASIC26.41■■□□□ 1.82
Pbrm1Q8BSQ9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pbrm1Q8BSQ9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC26.41■■□□□ 1.82
Pbrm1Q8BSQ9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pbrm1Q8BSQ9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pbrm1Q8BSQ9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pbrm1Q8BSQ9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pbrm1Q8BSQ9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Pbrm1Q8BSQ9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pbrm1Q8BSQ9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pbrm1Q8BSQ9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC26.4■■□□□ 1.82
Pbrm1Q8BSQ9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pbrm1Q8BSQ9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pbrm1Q8BSQ9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pbrm1Q8BSQ9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pbrm1Q8BSQ9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pbrm1Q8BSQ9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pbrm1Q8BSQ9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pbrm1Q8BSQ9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pbrm1Q8BSQ9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pbrm1Q8BSQ9 Gm9889-202ENSMUST00000206983 1577 ntBASIC26.39■■□□□ 1.82
Pbrm1Q8BSQ9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Pbrm1Q8BSQ9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pbrm1Q8BSQ9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC26.39■■□□□ 1.81
Pbrm1Q8BSQ9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Pbrm1Q8BSQ9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC26.39■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms