Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nhlrc1Q8BR37 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Gm7370-201ENSMUST00000219471 767 ntBASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nhlrc1Q8BR37 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nhlrc1Q8BR37 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Gm7213-201ENSMUST00000215977 950 ntBASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Gm10819-201ENSMUST00000099988 561 ntBASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nhlrc1Q8BR37 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Nhlrc1Q8BR37 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
Nhlrc1Q8BR37 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nhlrc1Q8BR37 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nhlrc1Q8BR37 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.14□□□□□ -0.31
Nhlrc1Q8BR37 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nhlrc1Q8BR37 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms