Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Gm18959-201ENSMUST00000208954 655 ntBASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rab11fip4Q8BQP8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rab11fip4Q8BQP8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rab11fip4Q8BQP8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab11fip4Q8BQP8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab11fip4Q8BQP8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab11fip4Q8BQP8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rab11fip4Q8BQP8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.77■□□□□ 0.6
Rab11fip4Q8BQP8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.77■□□□□ 0.6
Rab11fip4Q8BQP8 Gm4974-201ENSMUST00000209974 875 ntBASIC18.77■□□□□ 0.6
Rab11fip4Q8BQP8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Rab11fip4Q8BQP8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rab11fip4Q8BQP8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rab11fip4Q8BQP8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.77■□□□□ 0.59
Rab11fip4Q8BQP8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Gm38027-201ENSMUST00000192315 235 ntBASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab11fip4Q8BQP8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.75■□□□□ 0.59
Rab11fip4Q8BQP8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab11fip4Q8BQP8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms