Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Gm2274-201ENSMUST00000184539 609 ntBASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Mir7071-201ENSMUST00000184847 69 ntBASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sfr1Q8BP27 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sfr1Q8BP27 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sfr1Q8BP27 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Sfr1Q8BP27 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sfr1Q8BP27 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sfr1Q8BP27 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Gm7889-201ENSMUST00000185591 958 ntBASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms