Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col16a1Q8BLX7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col16a1Q8BLX7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col16a1Q8BLX7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Col16a1Q8BLX7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col16a1Q8BLX7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col16a1Q8BLX7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Col16a1Q8BLX7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Gm4995-201ENSMUST00000117247 432 ntBASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Gm44430-201ENSMUST00000203376 995 ntBASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col16a1Q8BLX7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col16a1Q8BLX7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col16a1Q8BLX7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Col16a1Q8BLX7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col16a1Q8BLX7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC22.23■■□□□ 1.15
Col16a1Q8BLX7 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.23■■□□□ 1.15
Col16a1Q8BLX7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col16a1Q8BLX7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Col16a1Q8BLX7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC22.23■■□□□ 1.15
Col16a1Q8BLX7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col16a1Q8BLX7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Gm27702-201ENSMUST00000184512 56 ntBASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Gm5264-201ENSMUST00000190584 848 ntBASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col16a1Q8BLX7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC22.2■■□□□ 1.15
Col16a1Q8BLX7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Col16a1Q8BLX7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Gm42670-201ENSMUST00000201816 1292 ntBASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 AC159093.1-201ENSMUST00000227779 380 ntBASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Gm45203-201ENSMUST00000206384 1831 ntBASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col16a1Q8BLX7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Gm18856-201ENSMUST00000178096 1374 ntBASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Gm25990-201ENSMUST00000102440 86 ntBASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 CT009713.7-201ENSMUST00000224689 571 ntBASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Psmb5-202ENSMUST00000227257 622 ntBASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col16a1Q8BLX7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms