Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Csnk1a1Q8BK63 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Csnk1a1Q8BK63 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.08■□□□□ 0.01
Csnk1a1Q8BK63 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Csnk1a1Q8BK63 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Csnk1a1Q8BK63 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.08■□□□□ 0
Csnk1a1Q8BK63 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Gm21814-202ENSMUST00000203277 873 ntBASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.07■□□□□ 0
Csnk1a1Q8BK63 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms