Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Gm10698-201ENSMUST00000182663 604 ntBASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc40Q8BI79 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc40Q8BI79 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Gm13168-201ENSMUST00000121771 632 ntBASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Gm10517-202ENSMUST00000192970 758 ntBASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc40Q8BI79 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Gm8520-201ENSMUST00000186517 868 ntBASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc40Q8BI79 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc40Q8BI79 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc40Q8BI79 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc40Q8BI79 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms