Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Gm6659-201ENSMUST00000174752 547 ntBASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Gm18101-201ENSMUST00000215769 548 ntBASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim23Q8BGX0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim23Q8BGX0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trim23Q8BGX0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim23Q8BGX0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim23Q8BGX0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Gm21559-201ENSMUST00000220638 855 ntBASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Gm8587-201ENSMUST00000076538 843 ntBASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim23Q8BGX0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Gm10566-201ENSMUST00000086739 996 ntBASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim23Q8BGX0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms