Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Gm5408-201ENSMUST00000197998 747 ntBASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Gm42569-201ENSMUST00000200539 472 ntBASIC14.36□□□□□ -0.11
Upk3bQ80YF6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Gm4968-201ENSMUST00000071458 858 ntBASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Upk3bQ80YF6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Upk3bQ80YF6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Gm26571-201ENSMUST00000181399 666 ntBASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk3bQ80YF6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.34□□□□□ -0.11
Upk3bQ80YF6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.33□□□□□ -0.11
Upk3bQ80YF6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Gm2559-201ENSMUST00000201323 363 ntBASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk3bQ80YF6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 236.2 ms