Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Gm17661-201ENSMUST00000170317 270 ntBASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Haglr-201ENSMUST00000100000 2085 ntBASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nucks1Q80XU3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.12■□□□□ 0.49
Nucks1Q80XU3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nucks1Q80XU3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nucks1Q80XU3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Gm29257-201ENSMUST00000186115 639 ntBASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nucks1Q80XU3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nucks1Q80XU3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nucks1Q80XU3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nucks1Q80XU3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nucks1Q80XU3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nucks1Q80XU3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Nucks1Q80XU3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nucks1Q80XU3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms