Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.23□□□□□ -0.13
Ttc28Q80XJ3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Gm15165-201ENSMUST00000118140 502 ntBASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Gm8000-201ENSMUST00000188378 592 ntBASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ttc28Q80XJ3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Gm11779-201ENSMUST00000118541 368 ntBASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Gm14057-201ENSMUST00000120631 482 ntBASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Gm44450-201ENSMUST00000199528 114 ntBASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Gm10175-201ENSMUST00000086013 645 ntBASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Gm44430-201ENSMUST00000203376 995 ntBASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ttc28Q80XJ3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ttc28Q80XJ3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ttc28Q80XJ3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ttc28Q80XJ3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ttc28Q80XJ3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ttc28Q80XJ3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Gm23935-201ENSMUST00000102303 57 ntBASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Gm24270-201ENSMUST00000102326 57 ntBASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Gm24245-201ENSMUST00000157318 57 ntBASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ttc28Q80XJ3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms