Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp6nlQ80XC3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp6nlQ80XC3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp6nlQ80XC3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp6nlQ80XC3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp6nlQ80XC3 Gm13884-201ENSMUST00000118103 829 ntBASIC18.7■□□□□ 0.58
Usp6nlQ80XC3 Gm43347-201ENSMUST00000200226 580 ntBASIC18.7■□□□□ 0.58
Usp6nlQ80XC3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Usp6nlQ80XC3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Mir8098-201ENSMUST00000184011 137 ntBASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp6nlQ80XC3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Gm15372-201ENSMUST00000120729 834 ntBASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Gm43514-201ENSMUST00000198852 424 ntBASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Usp6nlQ80XC3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Gm44450-201ENSMUST00000199528 114 ntBASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Gm6443-201ENSMUST00000203599 874 ntBASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Usp6nlQ80XC3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp6nlQ80XC3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp6nlQ80XC3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp6nlQ80XC3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp6nlQ80XC3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Usp6nlQ80XC3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp6nlQ80XC3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms