Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ush1gQ80T11 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ush1gQ80T11 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.52■□□□□ 0.56
Ush1gQ80T11 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ush1gQ80T11 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ush1gQ80T11 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ush1gQ80T11 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ush1gQ80T11 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.52■□□□□ 0.56
Ush1gQ80T11 Gm44771-201ENSMUST00000206975 626 ntBASIC18.52■□□□□ 0.56
Ush1gQ80T11 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.52■□□□□ 0.56
Ush1gQ80T11 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ush1gQ80T11 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ush1gQ80T11 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.52■□□□□ 0.56
Ush1gQ80T11 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ush1gQ80T11 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Ush1gQ80T11 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ush1gQ80T11 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Gm27742-201ENSMUST00000184667 60 ntBASIC18.51■□□□□ 0.55
Ush1gQ80T11 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.51■□□□□ 0.55
Ush1gQ80T11 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.51■□□□□ 0.55
Ush1gQ80T11 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ush1gQ80T11 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.5■□□□□ 0.55
Ush1gQ80T11 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Gm45328-201ENSMUST00000210942 917 ntBASIC18.5■□□□□ 0.55
Ush1gQ80T11 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Ush1gQ80T11 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ush1gQ80T11 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms