Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh8Q7TSK3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh8Q7TSK3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh8Q7TSK3 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Mir8112-201ENSMUST00000184382 131 ntBASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdh8Q7TSK3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh8Q7TSK3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms