Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Exosc3Q7TQK4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Gm18959-201ENSMUST00000208954 655 ntBASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Exosc3Q7TQK4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Exosc3Q7TQK4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Gm45058-201ENSMUST00000205810 766 ntBASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Exosc3Q7TQK4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Mir5130-201ENSMUST00000175160 84 ntBASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Exosc3Q7TQK4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Exosc3Q7TQK4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Exosc3Q7TQK4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms