Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Gm25990-201ENSMUST00000102440 86 ntBASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Gm6376-201ENSMUST00000209407 580 ntBASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
ShprhQ7TPQ3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Gm1401-201ENSMUST00000122048 772 ntBASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ShprhQ7TPQ3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ShprhQ7TPQ3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
ShprhQ7TPQ3 Gm5953-201ENSMUST00000220644 2616 ntBASIC24.01■■□□□ 1.43
ShprhQ7TPQ3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ShprhQ7TPQ3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC24.01■■□□□ 1.43
ShprhQ7TPQ3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ShprhQ7TPQ3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ShprhQ7TPQ3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ShprhQ7TPQ3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Gm8349-201ENSMUST00000182720 1003 ntBASIC24■■□□□ 1.43
ShprhQ7TPQ3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC24■■□□□ 1.43
ShprhQ7TPQ3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Gm37935-201ENSMUST00000192012 982 ntBASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Gm4995-201ENSMUST00000117247 432 ntBASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Gm11779-201ENSMUST00000118541 368 ntBASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Gm7230-201ENSMUST00000173026 815 ntBASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
ShprhQ7TPQ3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ShprhQ7TPQ3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ShprhQ7TPQ3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ShprhQ7TPQ3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ShprhQ7TPQ3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ShprhQ7TPQ3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ShprhQ7TPQ3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ShprhQ7TPQ3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ShprhQ7TPQ3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Gm8969-201ENSMUST00000199694 526 ntBASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ShprhQ7TPQ3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ShprhQ7TPQ3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC23.96■■□□□ 1.43
ShprhQ7TPQ3 Gm7506-201ENSMUST00000207758 815 ntBASIC23.96■■□□□ 1.43
ShprhQ7TPQ3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ShprhQ7TPQ3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ShprhQ7TPQ3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ShprhQ7TPQ3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ShprhQ7TPQ3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ShprhQ7TPQ3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC23.96■■□□□ 1.43
ShprhQ7TPQ3 Iqck-206ENSMUST00000208658 2891 ntBASIC23.95■■□□□ 1.43
ShprhQ7TPQ3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
ShprhQ7TPQ3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.43
ShprhQ7TPQ3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ShprhQ7TPQ3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ShprhQ7TPQ3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC23.95■■□□□ 1.42
ShprhQ7TPQ3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ShprhQ7TPQ3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
ShprhQ7TPQ3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ShprhQ7TPQ3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms