Protein–RNA interactions for Protein: Q7TN05

Ap1s3, AP-1 complex subunit sigma-3, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap1s3Q7TN05 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Smad6-203ENSMUST00000179458 273 ntBASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap1s3Q7TN05 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap1s3Q7TN05 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap1s3Q7TN05 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ap1s3Q7TN05 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Ap1s3Q7TN05 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.77□□□□□ -0.04
Ap1s3Q7TN05 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ap1s3Q7TN05 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ap1s3Q7TN05 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ap1s3Q7TN05 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ap1s3Q7TN05 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ap1s3Q7TN05 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ap1s3Q7TN05 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ap1s3Q7TN05 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ap1s3Q7TN05 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ap1s3Q7TN05 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ap1s3Q7TN05 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ap1s3Q7TN05 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms