Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Gm11950-201ENSMUST00000121615 838 ntBASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Gm10819-201ENSMUST00000099988 561 ntBASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubfd1Q78JW9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ubfd1Q78JW9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubfd1Q78JW9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubfd1Q78JW9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubfd1Q78JW9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Ubfd1Q78JW9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubfd1Q78JW9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubfd1Q78JW9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubfd1Q78JW9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubfd1Q78JW9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Gm13186-201ENSMUST00000118031 316 ntBASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Gm27704-201ENSMUST00000185094 107 ntBASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ubfd1Q78JW9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Gm6623-201ENSMUST00000173570 544 ntBASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubfd1Q78JW9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Mir770-201ENSMUST00000103252 94 ntBASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubfd1Q78JW9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubfd1Q78JW9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubfd1Q78JW9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubfd1Q78JW9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubfd1Q78JW9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.48■□□□□ 0.23
Ubfd1Q78JW9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubfd1Q78JW9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubfd1Q78JW9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubfd1Q78JW9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms