Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Gm13401-201ENSMUST00000117074 291 ntBASIC17.57■□□□□ 0.4
Cspg5Q71M36 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Gm7213-201ENSMUST00000215977 950 ntBASIC17.57■□□□□ 0.4
Cspg5Q71M36 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.57■□□□□ 0.4
Cspg5Q71M36 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Gm5587-201ENSMUST00000206270 674 ntBASIC17.56■□□□□ 0.4
Cspg5Q71M36 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.56■□□□□ 0.4
Cspg5Q71M36 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.56■□□□□ 0.4
Cspg5Q71M36 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Gm13474-201ENSMUST00000122466 815 ntBASIC17.55■□□□□ 0.4
Cspg5Q71M36 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cspg5Q71M36 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.55■□□□□ 0.4
Cspg5Q71M36 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.55■□□□□ 0.4
Cspg5Q71M36 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cspg5Q71M36 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Gm24841-201ENSMUST00000158676 357 ntBASIC17.54■□□□□ 0.4
Cspg5Q71M36 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cspg5Q71M36 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.53■□□□□ 0.4
Cspg5Q71M36 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.53■□□□□ 0.4
Cspg5Q71M36 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cspg5Q71M36 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms