Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Gm13216-201ENSMUST00000117145 591 ntBASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm8Q6ZWM4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm8Q6ZWM4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm8Q6ZWM4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm8Q6ZWM4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lsm8Q6ZWM4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm8Q6ZWM4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Gm11539-201ENSMUST00000119837 557 ntBASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Gm13436-201ENSMUST00000120418 567 ntBASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.74■□□□□ 0.43
Lsm8Q6ZWM4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Gm2274-201ENSMUST00000184539 609 ntBASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm8Q6ZWM4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms