Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1l1Q6T3U4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Npc1l1Q6T3U4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Gm11950-201ENSMUST00000121615 838 ntBASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1l1Q6T3U4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1l1Q6T3U4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1l1Q6T3U4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Gm37722-201ENSMUST00000193757 208 ntBASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Npc1l1Q6T3U4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1l1Q6T3U4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms