Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Gm14140-201ENSMUST00000119999 995 ntBASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Gm15173-201ENSMUST00000122049 433 ntBASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn10aQ6QIY3 Gm13418-201ENSMUST00000119097 944 ntBASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Gm12497-201ENSMUST00000138778 237 ntBASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Gm43575-201ENSMUST00000196420 516 ntBASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn10aQ6QIY3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Gm6550-201ENSMUST00000187574 993 ntBASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Grk6-206ENSMUST00000224995 2971 ntBASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn10aQ6QIY3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Gm14494-201ENSMUST00000118786 435 ntBASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scn10aQ6QIY3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Gm23935-201ENSMUST00000102303 57 ntBASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Gm24270-201ENSMUST00000102326 57 ntBASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Gm24245-201ENSMUST00000157318 57 ntBASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Gm10175-201ENSMUST00000086013 645 ntBASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.18■□□□□ 0.66
Scn10aQ6QIY3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scn10aQ6QIY3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms