Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Gm27742-201ENSMUST00000184667 60 ntBASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx58Q6Q899 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Gm17807-201ENSMUST00000186869 298 ntBASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.97■□□□□ 0.95
Ddx58Q6Q899 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Gm44450-201ENSMUST00000199528 114 ntBASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx58Q6Q899 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx58Q6Q899 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Gm27357-201ENSMUST00000183754 135 ntBASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx58Q6Q899 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx58Q6Q899 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx58Q6Q899 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx58Q6Q899 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx58Q6Q899 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx58Q6Q899 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx58Q6Q899 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx58Q6Q899 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.92■□□□□ 0.94
Ddx58Q6Q899 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx58Q6Q899 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.92■□□□□ 0.94
Ddx58Q6Q899 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx58Q6Q899 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx58Q6Q899 Gm18669-201ENSMUST00000216049 778 ntBASIC20.92■□□□□ 0.94
Ddx58Q6Q899 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.92■□□□□ 0.94
Ddx58Q6Q899 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx58Q6Q899 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx58Q6Q899 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms