Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup98Q6PFD9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Gm43347-201ENSMUST00000200226 580 ntBASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup98Q6PFD9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Nup98Q6PFD9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44357-201ENSMUST00000195897 142 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm19658-201ENSMUST00000196231 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44367-201ENSMUST00000196836 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44350-201ENSMUST00000197197 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44390-201ENSMUST00000197533 144 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44313-201ENSMUST00000198018 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44486-201ENSMUST00000198508 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44454-201ENSMUST00000198541 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44314-201ENSMUST00000199263 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44394-201ENSMUST00000199558 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44484-201ENSMUST00000199873 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44466-201ENSMUST00000200264 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm44359-201ENSMUST00000200671 138 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Mir8098-201ENSMUST00000184011 137 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Gm27867-201ENSMUST00000184778 125 ntBASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nup98Q6PFD9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.94■□□□□ 0.78
Nup98Q6PFD9 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup98Q6PFD9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.93■□□□□ 0.78
Nup98Q6PFD9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Gm44771-201ENSMUST00000206975 626 ntBASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nup98Q6PFD9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms