Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm29791-202ENSMUST00000207888 369 ntBASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc85bQ6PDY0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc85bQ6PDY0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Gm10060-201ENSMUST00000212002 111 ntBASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Gm5186-201ENSMUST00000218781 920 ntBASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc85bQ6PDY0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Auts2-212ENSMUST00000178555 309 ntBASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Gm2756-201ENSMUST00000195851 400 ntBASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc85bQ6PDY0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc85bQ6PDY0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc85bQ6PDY0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc85bQ6PDY0 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Gm14822-201ENSMUST00000122247 291 ntBASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Gm12260-201ENSMUST00000122447 411 ntBASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc85bQ6PDY0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc85bQ6PDY0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms