Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac4Q6NZM9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Gm5417-201ENSMUST00000079706 384 ntBASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Haglr-201ENSMUST00000100000 2085 ntBASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac4Q6NZM9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac4Q6NZM9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Gm37055-201ENSMUST00000191866 133 ntBASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac4Q6NZM9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Hdac4Q6NZM9 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Hdac4Q6NZM9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms