Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.07□□□□□ -0.16
Col7a1Q63870 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Col7a1Q63870 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col7a1Q63870 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col7a1Q63870 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col7a1Q63870 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col7a1Q63870 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.07□□□□□ -0.16
Col7a1Q63870 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Col7a1Q63870 Gm27494-201ENSMUST00000184735 189 ntBASIC14.07□□□□□ -0.16
Col7a1Q63870 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col7a1Q63870 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col7a1Q63870 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.06□□□□□ -0.16
Col7a1Q63870 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col7a1Q63870 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.06□□□□□ -0.16
Col7a1Q63870 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.06□□□□□ -0.16
Col7a1Q63870 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col7a1Q63870 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
Col7a1Q63870 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.05□□□□□ -0.16
Col7a1Q63870 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Col7a1Q63870 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.05□□□□□ -0.16
Col7a1Q63870 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.05□□□□□ -0.16
Col7a1Q63870 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.05□□□□□ -0.16
Col7a1Q63870 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Col7a1Q63870 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col7a1Q63870 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col7a1Q63870 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.04□□□□□ -0.16
Col7a1Q63870 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.04□□□□□ -0.16
Col7a1Q63870 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.04□□□□□ -0.16
Col7a1Q63870 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.04□□□□□ -0.16
Col7a1Q63870 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.04□□□□□ -0.16
Col7a1Q63870 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Col7a1Q63870 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Col7a1Q63870 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.04□□□□□ -0.16
Col7a1Q63870 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.04□□□□□ -0.16
Col7a1Q63870 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.04□□□□□ -0.16
Col7a1Q63870 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.04□□□□□ -0.16
Col7a1Q63870 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.04□□□□□ -0.16
Col7a1Q63870 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col7a1Q63870 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col7a1Q63870 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Col7a1Q63870 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.04□□□□□ -0.16
Col7a1Q63870 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.03□□□□□ -0.16
Col7a1Q63870 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col7a1Q63870 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col7a1Q63870 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col7a1Q63870 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col7a1Q63870 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col7a1Q63870 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col7a1Q63870 Gm12497-201ENSMUST00000138778 237 ntBASIC14.03□□□□□ -0.16
Col7a1Q63870 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.03□□□□□ -0.16
Col7a1Q63870 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col7a1Q63870 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col7a1Q63870 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col7a1Q63870 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col7a1Q63870 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Col7a1Q63870 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms