Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Commd3Q63829 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Commd3Q63829 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Commd3Q63829 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Commd3Q63829 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Commd3Q63829 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Commd3Q63829 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Commd3Q63829 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Commd3Q63829 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Commd3Q63829 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Commd3Q63829 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.21□□□□□ -0.13
Commd3Q63829 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Commd3Q63829 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.21□□□□□ -0.13
Commd3Q63829 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Commd3Q63829 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Commd3Q63829 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.2□□□□□ -0.14
Commd3Q63829 Gm13534-201ENSMUST00000121169 513 ntBASIC14.2□□□□□ -0.14
Commd3Q63829 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.2□□□□□ -0.14
Commd3Q63829 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.2□□□□□ -0.14
Commd3Q63829 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Commd3Q63829 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Commd3Q63829 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.19□□□□□ -0.14
Commd3Q63829 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.19□□□□□ -0.14
Commd3Q63829 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Commd3Q63829 Gm13146-201ENSMUST00000118508 780 ntBASIC14.19□□□□□ -0.14
Commd3Q63829 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Commd3Q63829 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.19□□□□□ -0.14
Commd3Q63829 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Commd3Q63829 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Reep4-203ENSMUST00000226563 1444 ntBASIC14.18□□□□□ -0.14
Commd3Q63829 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Commd3Q63829 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Commd3Q63829 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.18□□□□□ -0.14
Commd3Q63829 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.18□□□□□ -0.14
Commd3Q63829 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Commd3Q63829 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.18□□□□□ -0.14
Commd3Q63829 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.18□□□□□ -0.14
Commd3Q63829 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Commd3Q63829 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms