Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six2Q62232 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Six2Q62232 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.06■□□□□ 0.48
Six2Q62232 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Six2Q62232 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.06■□□□□ 0.48
Six2Q62232 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.06■□□□□ 0.48
Six2Q62232 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Six2Q62232 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Six2Q62232 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.06■□□□□ 0.48
Six2Q62232 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six2Q62232 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.06■□□□□ 0.48
Six2Q62232 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Six2Q62232 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Six2Q62232 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Six2Q62232 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.05■□□□□ 0.48
Six2Q62232 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Gm18958-201ENSMUST00000174258 762 ntBASIC18.05■□□□□ 0.48
Six2Q62232 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.05■□□□□ 0.48
Six2Q62232 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.05■□□□□ 0.48
Six2Q62232 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Six2Q62232 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Six2Q62232 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.05■□□□□ 0.48
Six2Q62232 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Six2Q62232 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.05■□□□□ 0.48
Six2Q62232 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six2Q62232 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.04■□□□□ 0.48
Six2Q62232 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.04■□□□□ 0.48
Six2Q62232 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Six2Q62232 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.04■□□□□ 0.48
Six2Q62232 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.04■□□□□ 0.48
Six2Q62232 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Six2Q62232 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six2Q62232 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.03■□□□□ 0.48
Six2Q62232 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Six2Q62232 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.03■□□□□ 0.48
Six2Q62232 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.03■□□□□ 0.48
Six2Q62232 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Gm5417-201ENSMUST00000079706 384 ntBASIC18.03■□□□□ 0.48
Six2Q62232 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Six2Q62232 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six2Q62232 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six2Q62232 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six2Q62232 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six2Q62232 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms