Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.32■□□□□ 0.2
Rai1Q61818 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.32■□□□□ 0.2
Rai1Q61818 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rai1Q61818 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rai1Q61818 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rai1Q61818 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rai1Q61818 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rai1Q61818 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.31■□□□□ 0.2
Rai1Q61818 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.31■□□□□ 0.2
Rai1Q61818 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rai1Q61818 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.31■□□□□ 0.2
Rai1Q61818 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.31■□□□□ 0.2
Rai1Q61818 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.31■□□□□ 0.2
Rai1Q61818 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.31■□□□□ 0.2
Rai1Q61818 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.31■□□□□ 0.2
Rai1Q61818 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.31■□□□□ 0.2
Rai1Q61818 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rai1Q61818 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.3■□□□□ 0.2
Rai1Q61818 Gm15165-201ENSMUST00000118140 502 ntBASIC16.3■□□□□ 0.2
Rai1Q61818 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.3■□□□□ 0.2
Rai1Q61818 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.3■□□□□ 0.2
Rai1Q61818 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.3■□□□□ 0.2
Rai1Q61818 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rai1Q61818 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rai1Q61818 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.29■□□□□ 0.2
Rai1Q61818 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Rai1Q61818 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.29■□□□□ 0.2
Rai1Q61818 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.29■□□□□ 0.2
Rai1Q61818 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rai1Q61818 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Mir5131-201ENSMUST00000175426 93 ntBASIC16.29■□□□□ 0.2
Rai1Q61818 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.29■□□□□ 0.2
Rai1Q61818 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.29■□□□□ 0.2
Rai1Q61818 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rai1Q61818 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rai1Q61818 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.28■□□□□ 0.2
Rai1Q61818 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Gm25925-201ENSMUST00000158314 306 ntBASIC16.28■□□□□ 0.2
Rai1Q61818 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.28■□□□□ 0.2
Rai1Q61818 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.28■□□□□ 0.2
Rai1Q61818 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.28■□□□□ 0.2
Rai1Q61818 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rai1Q61818 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rai1Q61818 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rai1Q61818 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms