Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.11■□□□□ 0.97
Irf9Q61179 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Irf9Q61179 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.11■□□□□ 0.97
Irf9Q61179 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Irf9Q61179 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf9Q61179 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.1■□□□□ 0.97
Irf9Q61179 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf9Q61179 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.1■□□□□ 0.97
Irf9Q61179 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Irf9Q61179 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf9Q61179 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Irf9Q61179 Gm44450-201ENSMUST00000199528 114 ntBASIC21.1■□□□□ 0.97
Irf9Q61179 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf9Q61179 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
Irf9Q61179 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Irf9Q61179 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Irf9Q61179 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Irf9Q61179 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Irf9Q61179 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Irf9Q61179 Gm45328-201ENSMUST00000210942 917 ntBASIC21.09■□□□□ 0.97
Irf9Q61179 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.09■□□□□ 0.97
Irf9Q61179 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.09■□□□□ 0.97
Irf9Q61179 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Irf9Q61179 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Irf9Q61179 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Irf9Q61179 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Irf9Q61179 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Irf9Q61179 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Irf9Q61179 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Irf9Q61179 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Irf9Q61179 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Irf9Q61179 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.08■□□□□ 0.97
Irf9Q61179 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.08■□□□□ 0.97
Irf9Q61179 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.08■□□□□ 0.97
Irf9Q61179 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.08■□□□□ 0.97
Irf9Q61179 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Irf9Q61179 Gm27742-201ENSMUST00000184667 60 ntBASIC21.08■□□□□ 0.97
Irf9Q61179 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Irf9Q61179 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Irf9Q61179 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Irf9Q61179 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Irf9Q61179 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Irf9Q61179 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Irf9Q61179 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Irf9Q61179 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Irf9Q61179 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Irf9Q61179 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Irf9Q61179 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Irf9Q61179 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Irf9Q61179 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Irf9Q61179 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Irf9Q61179 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Irf9Q61179 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Irf9Q61179 Gm17807-201ENSMUST00000186869 298 ntBASIC21.07■□□□□ 0.96
Irf9Q61179 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Irf9Q61179 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Irf9Q61179 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Irf9Q61179 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf9Q61179 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Irf9Q61179 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf9Q61179 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf9Q61179 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Irf9Q61179 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.06■□□□□ 0.96
Irf9Q61179 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.06■□□□□ 0.96
Irf9Q61179 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.06■□□□□ 0.96
Irf9Q61179 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.06■□□□□ 0.96
Irf9Q61179 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.06■□□□□ 0.96
Irf9Q61179 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf9Q61179 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.06■□□□□ 0.96
Irf9Q61179 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf9Q61179 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.06■□□□□ 0.96
Irf9Q61179 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf9Q61179 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf9Q61179 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf9Q61179 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.05■□□□□ 0.96
Irf9Q61179 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf9Q61179 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf9Q61179 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.05■□□□□ 0.96
Irf9Q61179 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.05■□□□□ 0.96
Irf9Q61179 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms