Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.57■□□□□ 0.56
Cln3Q61124 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Gm12644-201ENSMUST00000119935 606 ntBASIC18.57■□□□□ 0.56
Cln3Q61124 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.57■□□□□ 0.56
Cln3Q61124 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.57■□□□□ 0.56
Cln3Q61124 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.57■□□□□ 0.56
Cln3Q61124 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cln3Q61124 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln3Q61124 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln3Q61124 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln3Q61124 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cln3Q61124 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cln3Q61124 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cln3Q61124 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln3Q61124 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln3Q61124 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.56■□□□□ 0.56
Cln3Q61124 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cln3Q61124 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln3Q61124 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.56■□□□□ 0.56
Cln3Q61124 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cln3Q61124 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cln3Q61124 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cln3Q61124 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.56■□□□□ 0.56
Cln3Q61124 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cln3Q61124 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.55■□□□□ 0.56
Cln3Q61124 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.55■□□□□ 0.56
Cln3Q61124 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.55■□□□□ 0.56
Cln3Q61124 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cln3Q61124 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cln3Q61124 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cln3Q61124 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.54■□□□□ 0.56
Cln3Q61124 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cln3Q61124 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cln3Q61124 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.54■□□□□ 0.56
Cln3Q61124 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.54■□□□□ 0.56
Cln3Q61124 Gm13312-201ENSMUST00000119631 718 ntBASIC18.54■□□□□ 0.56
Cln3Q61124 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cln3Q61124 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.54■□□□□ 0.56
Cln3Q61124 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.54■□□□□ 0.56
Cln3Q61124 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.54■□□□□ 0.56
Cln3Q61124 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cln3Q61124 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cln3Q61124 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cln3Q61124 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.54■□□□□ 0.56
Cln3Q61124 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cln3Q61124 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.53■□□□□ 0.56
Cln3Q61124 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.53■□□□□ 0.56
Cln3Q61124 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.53■□□□□ 0.56
Cln3Q61124 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.53■□□□□ 0.56
Cln3Q61124 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.53■□□□□ 0.56
Cln3Q61124 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cln3Q61124 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.52■□□□□ 0.56
Cln3Q61124 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.52■□□□□ 0.56
Cln3Q61124 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 Gm27867-201ENSMUST00000184778 125 ntBASIC18.52■□□□□ 0.56
Cln3Q61124 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Cln3Q61124 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cln3Q61124 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.52■□□□□ 0.56
Cln3Q61124 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms